Our Research

A guide to bayesian networks software for structure and parameter learning, with a focus on causal discovery tools

Frontiers in Systems Biology

2025

Improving DirectLiNGAM for high-dimensional microbiome data: roots screening and eBIC based model selection

Frontiers in Systems Biology

2026

DBNcare: Towards an R Package for Dynamic Bayesian Networks Application in Healthcare

Artificial Intelligence in Medicine, AIME

2025

Gene network inference using continuous time Bayesian networks: a comparative study and application to Th17 cell differentiation

BMC Bioinformatics

2014

Continuous Time Bayesian Networks for Gene Network Reconstruction: A Comparative Study on Time Course Data

International Symposium on Bioinformatics Research and Applications

2014

Continuous time Bayesian networks identify Prdm1 as a negative regulator of TH17 cell differentiation in humans

Scientific Reports

2016

A synbiotic intervention modulates meta-omics signatures of gut redox potential and acidity in elective caesarean born infants

BMC Microbiology

2021

A Chatbot to Engage Parents of Preterm and Term Infants on Parental Stress, Parental Sleep, and Infant Feeding: Usability and Feasibility Study

JMIR Pediatrics and Parenting

2021

Computational reconstruction of biochemical networks

15th International Conference on Information Fusion

2012

The microbiomes of blowflies and houseflies as bacterial transmission reservoirs

Scientific Reports

2017

Microbial communities in the tropical air ecosystem follow a precise diel cycle

Proceedings of the National Academy of Sciences

2019

Ecological succession of the microbial communities of an air-conditioning cooling coil in the tropics

Indoor Air

2017

Experimental parameters defining ultra-low biomass bioaerosol analysis

npj Biofilms and Microbiomes

2021

Global transcriptomic responses of Escherichia coli K-12 to volatile organic compounds

Scientific Reports

2016

Pharyngeal Microbial Signatures Are Predictive of the Risk of Fungal Pneumonia in Hematologic Patients

Infection and Immunity

2021

Modeling Approaches Reveal New Regulatory Networks in Aspergillus fumigatus Metabolism

Journal of Fungi

2020

Complete Genome Sequence of Bacillus altitudinis Type Strain SGAir0031 Isolated from Tropical Air Collected in Singapore

Genome Announcements

2017

Discovering Trends in Environmental Time-Series with Supervised Classification of Metatranscriptomic Reads and Empirical Mode Decomposition

International Joint Conference on Biomedical Engineering Systems and Technologies

2018

Supervised Classification of Metatranscriptomic Reads Reveals the Existence of Light-dark Oscillations During Infection of Phytoplankton by Viruses

11th International Joint Conference on Biomedical Engineering Systems and Technologies, BIOSTEC

2018

Diel cycle of the tropical air microbiome

Biodiversity: Genomics and Evolution, BioGenEvo

2018

Calcineurin B in CD4+ T Cells Prevents Autoimmune Colitis by Negatively Regulating the JAK/STAT Pathway

Frontiers in Immunology

2018

Molecular insights into the regulation of expression of snake venom toxin genes in Pseudonaja textilis

The FASEB Journal

2016

Hybrid Syntactic-Semantic Reranking for Parsing Results of ECAs Interactions using CRFs

International Conference on Natural Language Processing

2010